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Clustered genes encoding 2-keto-L-gulonate reductase and L-idonate 5-dehydrogenase in the novel fungal D-glucuronic acid pathway

Publiceringsår

2017

Upphovspersoner

Kuivanen, Joosu; Arvas, Mikko; Richard, Peter

Abstrakt

<p>D-Glucuronic acid is a biomass component that occurs in plant cell wall polysaccharides and is catabolized by saprotrophic microorganisms including fungi. A pathway for D-glucuronic acid catabolism in fungal microorganisms is only partly known. In the filamentous fungus Aspergillus niger, the enzymes that are known to be part of the pathway are the NADPH requiring D-glucuronic acid reductase forming L-gulonate and the NADH requiring 2-keto-L-gulonate reductase that forms L-idonate. With the aid of RNA sequencing we identified two more enzymes of the pathway. The first is a NADPH requiring 2-keto-L-gulonate reductase that forms L-idonate, GluD. The second is a NAD <sup>+</sup> requiring L-idonate 5-dehydrogenase forming 5-keto-gluconate, GluE. The genes coding for these two enzymes are clustered and share the same bidirectional promoter. The GluD is an enzyme with a strict requirement for NADP <sup>+</sup>/NADPH as cofactors. The k <sub>cat</sub> for 2-keto-L-gulonate and L-idonate is 21.4 and 1.1 s <sup>-1</sup>, and the K <sub>m</sub> 25.3 and 12.6 mM, respectively, when using the purified protein. In contrast, the GluE has a strict requirement for NAD <sup>+</sup>/NADH. The k <sub>cat</sub> for L-idonate and 5-keto-D-gluconate is 5.5 and 7.2 s <sup>-1</sup>, and the K <sub>m</sub> 30.9 and 8.4 mM, respectively. These values also refer to the purified protein. The gluD deletion resulted in accumulation of 2-keto-L-gulonate in the liquid cultivation while the gluE deletion resulted in reduced growth and cessation of the D-glucuronic acid catabolism. </p>
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Organisationer och upphovspersoner

Teknologiska forskningscentralen VTT Ab

Kuivanen Joosu

Arvas Mikko

Richard Peter Orcid -palvelun logo

Publikationstyp

Publikationsform

Artikel

Moderpublikationens typ

Tidning

Artikelstyp

En originalartikel

Målgrupp

Vetenskaplig

Kollegialt utvärderad

Kollegialt utvärderad

UKM:s publikationstyp

A1 Originalartikel i en vetenskaplig tidskrift

Publikationskanalens uppgifter

Volym

8

Nummer

FEB

Artikelnummer

225

Publikationsforum

70489

Publikationsforumsnivå

1

Öppen tillgång

Öppen tillgänglighet i förläggarens tjänst

Ja

Öppen tillgång till publikationskanalen

Helt öppen publikationskanal

Licens för förläggarens version

CC BY

Parallellsparad

Nej

Publiceringsavgift för öppen tillgång €

2490

Betalningsår för den öppen tillgång publiceringsavgiften

2017

Övriga uppgifter

Vetenskapsområden

Växtbiologi, mikrobiologi, virologi; Biomedicinska vetenskaper

Nyckelord

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Språk

engelska

Internationell sampublikation

Nej

Sampublikation med ett företag

Nej

DOI

10.3389/fmicb.2017.00225

Publikationen ingår i undervisnings- och kulturministeriets datainsamling

Ja