Clustered genes encoding 2-keto-L-gulonate reductase and L-idonate 5-dehydrogenase in the novel fungal D-glucuronic acid pathway
Publiceringsår
2017
Upphovspersoner
Kuivanen, Joosu; Arvas, Mikko; Richard, Peter
Abstrakt
<p>D-Glucuronic acid is a biomass component that occurs in plant cell wall polysaccharides and is catabolized by saprotrophic microorganisms including fungi. A pathway for D-glucuronic acid catabolism in fungal microorganisms is only partly known. In the filamentous fungus Aspergillus niger, the enzymes that are known to be part of the pathway are the NADPH requiring D-glucuronic acid reductase forming L-gulonate and the NADH requiring 2-keto-L-gulonate reductase that forms L-idonate. With the aid of RNA sequencing we identified two more enzymes of the pathway. The first is a NADPH requiring 2-keto-L-gulonate reductase that forms L-idonate, GluD. The second is a NAD <sup>+</sup> requiring L-idonate 5-dehydrogenase forming 5-keto-gluconate, GluE. The genes coding for these two enzymes are clustered and share the same bidirectional promoter. The GluD is an enzyme with a strict requirement for NADP <sup>+</sup>/NADPH as cofactors. The k <sub>cat</sub> for 2-keto-L-gulonate and L-idonate is 21.4 and 1.1 s <sup>-1</sup>, and the K <sub>m</sub> 25.3 and 12.6 mM, respectively, when using the purified protein. In contrast, the GluE has a strict requirement for NAD <sup>+</sup>/NADH. The k <sub>cat</sub> for L-idonate and 5-keto-D-gluconate is 5.5 and 7.2 s <sup>-1</sup>, and the K <sub>m</sub> 30.9 and 8.4 mM, respectively. These values also refer to the purified protein. The gluD deletion resulted in accumulation of 2-keto-L-gulonate in the liquid cultivation while the gluE deletion resulted in reduced growth and cessation of the D-glucuronic acid catabolism. </p>
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Publikationstyp
Publikationsform
Artikel
Moderpublikationens typ
Tidning
Artikelstyp
En originalartikel
Målgrupp
VetenskapligKollegialt utvärderad
Kollegialt utvärderadUKM:s publikationstyp
A1 Originalartikel i en vetenskaplig tidskriftPublikationskanalens uppgifter
Journal/Serie
Volym
8
Nummer
FEB
Artikelnummer
225
ISSN
Publikationsforum
Publikationsforumsnivå
1
Öppen tillgång
Öppen tillgänglighet i förläggarens tjänst
Ja
Öppen tillgång till publikationskanalen
Helt öppen publikationskanal
Licens för förläggarens version
CC BY
Parallellsparad
Nej
Publiceringsavgift för öppen tillgång €
2490
Betalningsår för den öppen tillgång publiceringsavgiften
2017
Övriga uppgifter
Vetenskapsområden
Växtbiologi, mikrobiologi, virologi; Biomedicinska vetenskaper
Nyckelord
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Språk
engelska
Internationell sampublikation
Nej
Sampublikation med ett företag
Nej
DOI
10.3389/fmicb.2017.00225
Publikationen ingår i undervisnings- och kulturministeriets datainsamling
Ja