European distributed infrastructure for life-science information
Förkortning
ELIXIR (Suomi)
Beskrivning av infrastrukturen
The goal of ELIXIR is to orchestrate the collection, quality control and archiving of large amounts of biological data produced by life science experiments. Some of these datasets are highly specialised and would previously only have been available to researchers within the country in which they were generated. For the first time, ELIXIR is creating an infrastructure – a kind of highway system – that integrates research data from all corners of Europe and ensures a seamless service provision that is easily accessible to all. In this way, open access to these rapidly expanding and critical datasets will facilitate discoveries that benefit humankind. Science and technology change very quickly, and exploiting these advances can be a challenge. ELIXIR partners are building an intelligent, responsive and sustainable system that will deliver the fruits of these advances to the scientists upon whom so many hopes are pinned, and whose curiosity is the very cornerstone of progress. Finland is an ELIXIR member (State agreement 2015/7, Finlex) and CSC hosts the ELIXIR Finland node. National collaboration between CSC and Finnish stakeholders is covered by the Biomedinfra consortium agreement between ELIXIR, BBMRI and EATRIS and the ELIXIR Finland’s membership in the Biocenter Finland bioinformatics network consisting of all major biocenters in Finland. ELIXIR Finland, hosted at CSC, specializes in the European collaboration, provides services in cloud infrastructure, authentication and authorization targeted for biomedical organizations, and resources for training. Node services are currently in production, and actively used in European infrastructure collaborations as well as by the Biomedinfra consortium organisations FIMM and THL (e.g. BBMRI.fi), and Biocenter Finland infrastructure.
Vetenskaplig beskrivning
Verksamheten har inletts
2016
Ansvarig organisation
CSC – IT Center for Science
Nyckelord
cloud computing, IaaS
Forskningsinfrastrukturens tjänster
cPouta, ePouta - CSC Infrastructure as a Service cloud for bio and health use cases
REMS - ELIXIR authentication and authorisation infrastructure services
HAKA
KALMAR2
eduGAIN
Large biological data mirroring (pilot)
BBMRI.fi
Researcher and Trainer Training in bioinformatics
International standards for biological data and metadata
Tools and Databases run by ELIXIR Nodes
The European Nucleotide Archive (ENA)
UniProt
Protein Data Bank in Europe (PDBe)
Pfam
Ensembl
Gene Ontology
InterPro
IntEnz
ArrayExpress
ChEBI (Chemical Entities of Biological Interest)
IntAct
PRIDE (The Proteomics Identifications Database)
Reactome
BioModels
The European Genome-phenome Archive (EGA)
The Ontology Lookup Service (OLS)
Ensembl Genomes
Expression Atlas
ChEMBL
EBIMetagenomics
Enzyme Portal
EuropePMC
MetaboLights
Rfam database
Övriga uppgifter
Vetenskapsområden
MEDICINISKA VETENSKAPER, VÅRDVETENSKAPER
Klassifikationer
På Finlands Akademis vägvisare
true
Taggar
urn:nbn:fi:research-infras-2016072517