Combining StarDist and TrackMate example 1 - Breast cancer cell dataset

Beskrivning

Description: Contains a StarDist example training dataset, a test dataset, and the StarDist model generated using ZeroCostDL4Mic (see https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist) Training dataset: 72 Paired microscopy images (fluorescence) and corresponding masks Microscopy data type: Fluorescence microscopy (SiR-DNA) and masks obtained via manual segmentation (see https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist for details about the segmentation) Microscope: Spinning disk confocal microscope with a 20x 0.8 NA objective Cell type: DCIS.COM Lifeact-RFP cells File format: .tif (16-bit for fluorescence and 8 and 16-bit for the masks) Image size: 1024x1024 (Pixel size: 634 nm)
Visa mer

Publiceringsår

2020

Typ av data

Upphovspersoner

Zenodo - Utgivare

Guillaume Jacquemet Orcid -palvelun logo - Upphovsperson

Projekt

Övriga uppgifter

Vetenskapsområden

Biokemi, cell- och molekylärbiologi

Språk

Öppen tillgång

Öppet

Licens

Creative Commons Attribution 4.0 International (CC BY 4.0)

Nyckelord

Ämnesord

Temporal täckning

undefined

Relaterade till denna forskningsdata