Liver fat biomarkers study from the 'Identification of gut-derived factors responsible for exercise-induced reward, physical inactivity and obesity' project

Beskrivning

The study aimed at finding gut microbiota signatures and metabolite markers in plasma and feces related to high liver fat content in humans. Based on imaging, we divided study participants into low (<5%, LF, n=25) and high (>5%, HF, n=39) liver fat groups. Fecal (LF n=14, HF n=25) and plasma (LF n=11, HF n=7) metabolomes of subsets of participants were studied using liquid chromatography/high resolution mass spectrometry. The gut microbiota were analyzed using 16S rRNA gene sequencing. Additionally, blood clinical variables, body composition and diet were studied. The list of metadata variables can be found below. They are categorized by the type of sample and/or analysis. BLOOD CLINICAL VARIABLES & UNITS alanine aminotransferase, ALT (U/L) aspartate aminotransferase, AST (U/L) gamma-glutamyltransferase, GGT(U/L) total cholesterol (mmol/L) high-density lipoprotein, HDL (mmol/L) low-density lipoprotein, LDL (mmol/L) triglycrides (mmol/L) glucose (mmol/L) insulin (iU/L) HOMA-IR BODY COMPOSITION VARIABLES & UNITS Height (cm) Weight (kg) body mass index, BMI (kg/m2) Waist circumference (cm) blood pressure (BP) systolic (mm Hg) blood pressure (BP) diastolic (mm Hg) Liver fat % GUT MICROBIOTA COMPOSITION fastq files of the sequences OUT counts per each sample relative abundance per each sample diversity measures (Shannon, Chao1, phylogenetic diversity, Bray Curtis distance) METABOLITES plasma metabolites & identification information fecal metabolites & identification information DIETARY INTAKES & UNITS (from 3 different days & average from 3 days) Energy (kJ) Energy (kcal) Protein (g) Carbohydrates (g) Fat (g) Alcohol Coffee (dl/3 days) * Fatty acids (g) Monosaturated Fatty acids (g) Polyunsaturated Fatty acids (g) Sucrose (g) Fiber, total (g) Vitamin C (mg) Thiamine (B1) (mg) Vitamin E (mg) Vitamin A (µg) Vitamin D (µg) Riboflavin (B2) (mg) Vitamin K (mg) Vitamin B6 (mg) Folate (B9) (µg) Sodium (mg) Magnesium (mg) Calcium (mg) Potassium (mg) Iron (mg) Iodine (µg) Phosphorus (mg) Selenium (µg) Zinc (mg) Fatty acids, total (g) Cholesterol (mg) Fatty acids, trans (g) Lactose (g) Fiber, total amount (g) Vitamin B12 (cobalamine) (µg) Salt (mg) Omega-6 Fatty acids (g) Omega-3 Fatty acids (g).
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Publiceringsår

2023

Typ av data

Upphovspersoner

Hospital District of Helsinki and Uusimaa - Medarbetare

Jyväskylä universitet - Utgivare, Medarbetare

Terveystieteiden laitos

Pekkala, Satu - Rättighetsinnehavare, Upphovsperson

Psykologian laitos

Lensu, Sanna Orcid -palvelun logo - Upphovsperson

Liikuntatieteellinen tiedekunta

Hintikka, Jukka - Upphovsperson

Mäkinen, Elina - Upphovsperson

Unknown

Pietiläinen, Kirsi H. - Medarbetare, Upphovsperson

Hakkarainen, Antti - Upphovsperson

Juvonen, Risto - Upphovsperson

Keski-Rahkonen, Pekka - Upphovsperson

Kuula, Juho - Upphovsperson

Laukkanen, Jari A. - Upphovsperson

Lehtonen, Marko - Upphovsperson

O’Connell, Thomas - Upphovsperson

Projekt

Övriga uppgifter

Vetenskapsområden

Rättsmedicin och övrig medicinsk vetenskap

Språk

engelska

Öppen tillgång

Begränsad tillgång

Licens

Other (Not Open)

Nyckelord

Ämnesord

fettlever, insulinresistens, mikrobiologi, ämnesomsättning

Temporal täckning

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